Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862355.1_cds_XP_016515294.1_27657
CDS Infomation

[gene=LOC107832005] [db_xref=GeneID:107832005] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016515294.1] [location=62949..64406] [gbkey=CDS]
Sequence

ATGGAAGGGCATACAGGACAACAAGAGGAGCTATTTGCAGAAATTGATCAAAAAATAGAT
GATCAAGCATTCAGTGATGGTGAAGCAGCTTCCTGTACCACAGATGGGAATGAAATAGTG
AATATTGTCATAGCAGATCCAATTCTGCAAGCAGACTCTATGCCAAGAGAATATACATAC
TCGTGGAGAAGACGAATACAGAAAGTTTTACCCCTGCTGAAGATGGACGAATACAACAGG
CACGAGTATGATCCGAAGGTAGTTTCATTGGGACCTTATCACCATGGTAAACCAGAGCTG
CAGCTAGCAGAGGATTTCAAGCATATAGCCCTTGAAATGTTTGTCTCAGGCAGTAGCAAG
GACGTAGCTTATTTCTATAACAAGATACTAGAAGTTGTCGACAATGCAAGAAATTGTTAT
GTTGATGGCTTCGCAGACAAGTACAATGATCATGAATTTGCCTTAATGATGCTTCTTGAT
GCCTGCTTTATTATCAACCACATCGAGCTTAGCACATCAGATAGGTATAACAAACTCAGA
ACCACCAGGCACCATCTTGGAATGTTGGCATTATCAACAACAGTTCGAGACATGTTTTTG
CTTGAGAATCAAATTCCTTTTTGGATCTTGAAACTCTTGATCAGCTTACGATATGACAAG
GATGAAGGAGAAGAATTGCTCGAGATGTTCTTGAATTTCACCCTCTTTGGTGAATATGAT
CAAAAAGACGAAATGAGTTACAAACATGCAGAAGAGCCTCTGCATCTTCTTGAAGCATTT
AGAACAAGACTTGTCTCACAATACAGTGAAGTCAGGAATTTGCATCGTACTTGCACACCT
CAATGGCTCAAAAGGAAGAAAAGTATTAGCAATGAGCGTGCTAATATGAAAAGTTACATT
CACTCCTTTCGTTCGGTGACTGATCTCAAAGCTAAGGGAATTTACTTCAGACCTAGCTGT
ACTCATTCATTGAAGGACATAAAATTCAAATCAAGATACTTCTATGGCCAGCTTGAACTT
CCAACTTGGTATGTTTCTATCTACACAAAGGCATTCTTCTTGAACATGATAGCCTATGAG
ATGTGCCCAAATACTGTTACTGATCGTGCTGTGACATCGTACGTATACTTCATGAAGTCA
TTAATCGAGAGCCCCAGGGATGTAAAAGAACTACGCGAAAAACAGATACTATTCAACATG
CTTGGTAGCGATGAGGAAGTGGCAAGAATGTACAAAGAGATCAATACTTATGGAGTGAAC
AATGCGCACATTTTCTACAATGTGAAAGAAAAAATTCAGGAGCACTACCATAACAGGGCA
AAAACATGGATAGCTGAGCTGATACACACTTACTTTAGGAGTCCATGGACTGCTCTAGCA
TTACTTGCAGCTACTTTCTTGCTTTGCTTGACTTTTACTCAAACCTACTTTACAATAAAT
CCCAATCCCAGATCATGA

Peptide Sequence

PEP ID

XP_016515294.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MEGHTGQQEELFAEIDQKIDDQAFSDGEAASCTTDGNEIVNIVIADPILQADSMPREYTY
SWRRRIQKVLPLLKMDEYNRHEYDPKVVSLGPYHHGKPELQLAEDFKHIALEMFVSGSSK
DVAYFYNKILEVVDNARNCYVDGFADKYNDHEFALMMLLDACFIINHIELSTSDRYNKLR
TTRHHLGMLALSTTVRDMFLLENQIPFWILKLLISLRYDKDEGEELLEMFLNFTLFGEYD
QKDEMSYKHAEEPLHLLEAFRTRLVSQYSEVRNLHRTCTPQWLKRKKSISNERANMKSYI
HSFRSVTDLKAKGIYFRPSCTHSLKDIKFKSRYFYGQLELPTWYVSIYTKAFFLNMIAYE
MCPNTVTDRAVTSYVYFMKSLIESPRDVKELREKQILFNMLGSDEEVARMYKEINTYGVN
NAHIFYNVKEKIQEHYHNRAKTWIAELIHTYFRSPWTALALLAATFLLCLTFTQTYFTIN
PNPRS

Transcript Sequence

Gene sequence data has not been registered.